CDS

Accession Number TCMCG057C26678
gbkey CDS
Protein Id XP_018491742.1
Location complement(join(29862132..29862209,29862289..29862577,29862662..29862843,29862984..29863886,29863961..29864050,29864176..29864259,29864380..29864433,29864616..29864750,29864836..29864931,29865175..29865438,29865775..29865864,29865954..29866013,29866330..29866396,29866612..29866703,29866792..29866893))
Gene LOC108862187
GeneID 108862187
Organism Raphanus sativus

Protein

Length 861aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636240.1
Definition PREDICTED: nuclear pore complex protein NUP93B [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category D
Description Nucleoporin interacting component (Nup93 Nic96-like) family protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14309        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046931        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051292        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAACGACCAGGAGATGAGTGGATGGACTGATCTTCTCCATTCTTCTACGAAGCTTCTCGAGCAAGCGGCTCCGTCTTCTCAGTTCCCTCCTCTTCAGAGGAATTTGGATCAATTGGAAGCGTTGTCGAGGAAGCTCAAGGCTAAAACCTTAAGAAACGAAGCTCCTTCACAGTCTATTGCTGCCACTAGACTACTTTCACGTGAGGGAATCAATGCAGAGCAATTGTCTCGCGATCTAAAGTCGTTCGAGTTGAAGACGACATTTGAAGATGTATTCCCTGCCGAGGCAACAAGTGTTGAAGAATACCTGCAACAGGTTCATGAAATGGCTATGGTATCGGCTATACAGGAGGCCCAGAAAGATAATGTTCGCAGCTTTAATGATTATATGCTGAAAGTATTGGAGGAGGACTGTAGAAAAGAAAAACGTGACTTCCTTCAAAGTCGTAGCAAAATTTCATTGGTACCTAAGACCAAGTTGATCGATACAAGCAGACACACTCATGCTGGTCAGATGGTGCCTGTGACTTCGAGTCCTCAAGTATCTTCAAACACTGGAACAGAACTTGCGTCTCTGGCTAACAGACCAATTCATGAGAAGAAAGCACATGTCTATGCAGAGGTTGTGAAGAAACTTAATTTTTCAAGAGAACGAGGCTTGCCATTTAAGCCTGCAACATCGTTCAAAGATGCTTATGAAAGTCTAGGGATTGATTTGACTCGTGGGAAATCAGTCAATGTGCAGAAACTATGGCAACTTATTCAGGCAATGACGGGTGAAGATTCAGCAGTACGCAAAGATGTTTCCAAGAGGATGTCCCTCGTGATAGGTGCAAGACGCCACTTGGAATGTGGGCATCAGAAACATATAATGGATACAATTCAAAGTCATCCTACACAAGCTGCTCTTGGTGGATCTGTTGGAAATTTGCAAAGAATTCGTGCCTTTCTTCGGATTCGTCTACGGGAGTATGGAATTTTGGATTTTGATTCAGGTGACGCGCGTAGACAGCCTCCAGTTGATACTACTTGGCAGCAGATATATTTTTGCTTGAGAAGTGGCTACTATGAGGAGGCAAGAGAAATCGCCCAATCATCTCGATCATCTCAACAACAGTTTGCTCCGCTGCTTACAGAGTGGATTACCACAGGTGGTACTGTAACTGCAAATACCGCCGCTATTGCTTCTGAAGAATGTGAGAAATTGTTTAGGTTGGGTGATCGGTTGGGCCAAACAACATATGACAAGAAGAAACTCCTACTCTACACTATCATATCTGGTTCCCGAAGGCAGATTGATCGCATCTTGAGGGAATTTTCGACGCTTTTCAACACAATAGAAGACTTTCTCTGGTTCAATTTATCATGCATACGTGATGTTGCTAGTGGATCTTCATCTTTGGTCTTCAACGATGGGCTAGTTCCTTACAGTTTAGATGACCTTCAGGCTTATCTTAATAAGTTTGAGCCTTCTTATTACACTAAGAACGGCAAAGACCCTCTGGTTTACCCATATGTTCTGCTTCTTAGCAATCAGTTACTACCGGCGATCATGTACATGTCTCAAGAAGCAGGAGATGAAGGGTATAACATCGACGCTGTCCATATAGCTATTTCGCTAGTGGACCATTCCGTTATCTCTGAAGGCTCTGGGACTGGGCACAAACTTAGCGTGATGGATGCAAATGCTGAGGCGTCGAGCCTGATAAGGCAATTCGGGTCGATGTATTTGCATCATGGTGATCTGCAAATGACGCTGGAATACTATGCACAAGCTGCTATTGCAGTAGGAGGGGGGCAACTAGCTTGGTCCGGGAGAAGCAATGTTGATCAGCAAAGGCAAAGGAACTTGATGCTGAAGCAACTTCTTACTGAGATTCTGTTACGAGAAGGTGGTATTAACTTTCTGCTTGGTGCTAGAGGTTCCGGTGAAGAAGGCGAGCTTGGAAGATTTTTCCCTGATTCAAAACTGAGGCAGCAGTTCTTGATCGAAGCTGCGCATCAATGTCAAGACGCTGGATTGTTTGAGAAATCTATAGAAATACAGAAGAGAGTTGGTGCCTATGCGGCTGCCTTGGAAACAATAAACAAGTGTCTGTCTGAAGCCATTTGCTCTCTTCTCCGTGGAAGGTCAGATGGTGAAAGCCGAACAGCAGGACTCGTTCTCTCAGGAAACGAGATTCTCGACACCTACAGATACTGCCCTGAAATCGGTCAGGAAAGAGATCGGGTCAATGAACAAGAAACAATACTACGAGAGCTTGAGGCAATACTGTCGATCCACAAGTTGGCCAGACTAGGCAATCATCTAGAGGCCTTGAAAGAAGCCGCTAAACTCCCGTTCCTTCATCTCGATCCGAGACTCTCGGACACAACCCCGGACGAGTTCCAGAGAGCGTCCCCTTACTTCAAGACCTGCGTACCTGATTTACTAAAAGTTGTTTTGACTTGTCTGGACAACGTACCCGACCGTGACGGGTCTATCCGAGTCATGAGATCTAAGATTGCTGGTTTTCTTGCAAGCAACACACATCAGAACTGGCCTCGAGACTTGTACGAGAAGGTGGCTCGAAGCTTTTGA
Protein:  
MANDQEMSGWTDLLHSSTKLLEQAAPSSQFPPLQRNLDQLEALSRKLKAKTLRNEAPSQSIAATRLLSREGINAEQLSRDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQKDNVRSFNDYMLKVLEEDCRKEKRDFLQSRSKISLVPKTKLIDTSRHTHAGQMVPVTSSPQVSSNTGTELASLANRPIHEKKAHVYAEVVKKLNFSRERGLPFKPATSFKDAYESLGIDLTRGKSVNVQKLWQLIQAMTGEDSAVRKDVSKRMSLVIGARRHLECGHQKHIMDTIQSHPTQAALGGSVGNLQRIRAFLRIRLREYGILDFDSGDARRQPPVDTTWQQIYFCLRSGYYEEAREIAQSSRSSQQQFAPLLTEWITTGGTVTANTAAIASEECEKLFRLGDRLGQTTYDKKKLLLYTIISGSRRQIDRILREFSTLFNTIEDFLWFNLSCIRDVASGSSSLVFNDGLVPYSLDDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSNQLLPAIMYMSQEAGDEGYNIDAVHIAISLVDHSVISEGSGTGHKLSVMDANAEASSLIRQFGSMYLHHGDLQMTLEYYAQAAIAVGGGQLAWSGRSNVDQQRQRNLMLKQLLTEILLREGGINFLLGARGSGEEGELGRFFPDSKLRQQFLIEAAHQCQDAGLFEKSIEIQKRVGAYAAALETINKCLSEAICSLLRGRSDGESRTAGLVLSGNEILDTYRYCPEIGQERDRVNEQETILRELEAILSIHKLARLGNHLEALKEAAKLPFLHLDPRLSDTTPDEFQRASPYFKTCVPDLLKVVLTCLDNVPDRDGSIRVMRSKIAGFLASNTHQNWPRDLYEKVARSF